Genomics

123Genomics
A one stop location where one can find most of the freely available internet resources related to genomics and bioinformatics.
NCBI Genomes and Maps
Links to all of the Genomes, Maps, Sequence databases available from NCBI.
Jackson Labs Mouse Genetics Databases
The world’s leading resource for mouse genetic data, colony management, research techniques and scientific services, including MMRRC, FIMRE, IMSR, Phenome and Genome, Strain and Mutant databases.
Charles River Research Animal Models and Resources
DNA Learning Center - 3D Animations
A collection of 3D learning tools from Cold Spring Harbor Laboratory. Pretty cool!
Magpie and Bluejay Automated Genomics Project
(University of Calgary)
The Multi-purpose Automated Genome Project Investigation Environment (MAGPIE, http://magpie.ucalgary.ca/) is a software package for the automated curation and presentation of DNA and protein sequences. Bluejay is a XML application/applet viewer specialized for DNA and protein data.
Long non-coding RNA database: lncrnadb
lncRNAdb is a database providing comprehensive annotations of eukaryotic long non-coding RNAs (lncRNAs). You can search by lncRNA name (including known aliases), annotation, sequence, species or function tags.
microRNA database: miRBase
The miRBase database is a searchable database of published miRNA sequences and annotation. Both hairpin and mature sequences are available for searching and browsing, and entries can also be retrieved by name, keyword, references and annotation. All sequence and annotation data are also available for download.
Caenorhabditis genome sequencing and analysis at the Sanger Institute
From Sanger Lab
WormBook and WormMethods (C. elegans)
A comprehensive, open-access collection of peer-reviewed chapters covering topics related to the biology of Caenorhabditis elegans. Includes an up-to-date collection of methods and protocols for researchers.
C. elegans
From Wormbase
ExPASy Bioinformatics Resource Portal
This site provides links to resources related to biological macromolecules.
Yeast - Saccharomyces cerevisiae
From Stanford
Yeast - Schizosaccharomyces pombe
From NCBI
Yeast - Saccharomyces cerevisiae
From UCSC
Yeast - Schizosaccharomyces pombe
From the Forsburg Lab
Zebrafish Model Organism Database (ZFIN)
Goals for ZFIN are a) to be the community database resource for the laboratory use of zebrafish, b) to develop and support integrated zebrafish genetic, genomic and developmental information, c) to maintain the definitive reference data sets of zebrafish research information, d) to link this information extensively to corresponding data in other model organism and human databases, e) to facilitate the use of zebrafish as a model for human biology and f) to serve the needs of the research community.
Zebrafish - Brachydanio reria resources